Partner study description

Several investigators contributed to the early stages of the MalariaGEN P. falciparum Community Project by providing samples that were not themselves basis of a partner study, but were used in establishing our laboratory and analytical pipelines. For example, some samples were used to compare early Illumina sequencing outputs with capillary sequencing data, or for preliminary analysis of population structure.

Publications

• Genomic epidemiology of artemisinin resistant malaria
  MalariaGEN P. falciparum Community Project
  eLife, 2016; 5 e08714
  10.7554/eLife.08714
• Genetic architecture of artemisinin-resistant Plasmodium falciparum
  Miotto et al
  Nature Genetics, 2015; 47(3) 226-34
  10.1038/ng.3189
• Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing
  Manske et al.
  Nature, 2012; 487(7407) 375-9
  10.1038/nature11174